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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015809960.1_cds_XP_016496020.1_10284
CDS Infomation

[gene=LOC107815028] [db_xref=GeneID:107815028] [protein=UPF0187 protein At3g61320, chloroplastic-like] [protein_id=XP_016496020.1] [location=join(30174..30875,31922..32089,32334..32540,33258..33434)] [gbkey=CDS]
Sequence

ATGACAAATTCAAGAACCCTTTTCAGCATTCAATCTCCAACCAATGCATCTTTTTCTTCC
CATTTTACCCTCAAACTACCTTCAAAATTACAACAACAATCATTCCCTTCCAAACTTAGC
TACAAGAAGTTCAGTTTCAGTACTTTCAAAGTCCGTTGTTGCCCTCAACAAACTCCAGAG
AATCAAAATTCAACTTCTGCCCTTATCTCAATTCTTCGTATAATACCTGATTGGGCTGAC
AGAATTCAAGAAGAAGGTATGAAAAAGAAGAGATCTTTATACAAACATGAAAGTTGGGTG
CAACATAGAAGTTCTTTGAGGCATGTTAGGCACTTGTTTTCGAGCTTGAATTCGCGTGTT
ATTTTGTCGTTGGTTACTCCGGTTATAGCTTTTACTTCAGTGGCAGTAGTGATTGCTAGT
TATAATTCTGCTGTTTCAATGCATTGGTTGCCTGAGTTTTTCCCTGTATTGAGAGCTAGT
CCACTGCCATATCAGTTGACAGCTCCAGCTCTGGCGCTTCTTTTGGTGTTTAGGACAGAG
GCATCGTACTCGAGGTTCGAAACAGGGAAGAAGGCTTGGACTAAAGTGATTGCTGGAACC
AATGATTTTGCTAGGCAGGTCATTGCTTGTGTTGATAAGAGTGATGCTGTGCTCAAAGAA
GCACTTTTACAGTATATCATGGCATTTCCAGTTGCCTTGAAGTGCCACATAACATACGGC
TCGGATATAGCAAGTGATCTCAAAAACTTACTTGAGGCTGATGATCTAGCATTAGTTCTC
AGTTCTAAGCATCGCCCTCGTTGCGTCATTGGGTTCATCTCTCAGTGCCTTCAGTCATTA
AACTTGGAGGGAACAAAGCTGACTCAGCTGGAGTCAAAGATTTCTTGTTTCCATGAAGGT
ATTGGTGTATGTGAACAACTCGCGGGCATACCTATTCCGCTTTCATACACTCGGTTGACT
TCAAGGTTCTTGGTCCTTTGGCATCTCACTCTTCCTATAATACTTTGGGACGATTGTCAT
TGGATTGTGGTTCCAGCTACTTTCATAAGTGCTGCTTCCTTATTCTGCATTGAAGAGGTT
GGTGTCCTTATCGAGGAGCCATTTCCAATGCTTGCACTTGATGAGCTCTGTCAGCTTGTT
CGCGACAACATCCAAGAAGCAATGGCAAACGAAAAGCAGATTCAAGAAAGATTAAATGCC
AAAAGAAAGAAATGTTTTAGTGAACATTCTCCAAATGGTTGGCCAACCTCATAG

Peptide Sequence

PEP ID

XP_016496020.1
PEP Infomation

PREDICTED: UPF0187 protein At3g61320, chloroplastic-like [Nicotiana tabacum]
Sequence

MTNSRTLFSIQSPTNASFSSHFTLKLPSKLQQQSFPSKLSYKKFSFSTFKVRCCPQQTPE
NQNSTSALISILRIIPDWADRIQEEGMKKKRSLYKHESWVQHRSSLRHVRHLFSSLNSRV
ILSLVTPVIAFTSVAVVIASYNSAVSMHWLPEFFPVLRASPLPYQLTAPALALLLVFRTE
ASYSRFETGKKAWTKVIAGTNDFARQVIACVDKSDAVLKEALLQYIMAFPVALKCHITYG
SDIASDLKNLLEADDLALVLSSKHRPRCVIGFISQCLQSLNLEGTKLTQLESKISCFHEG
IGVCEQLAGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEV
GVLIEEPFPMLALDELCQLVRDNIQEAMANEKQIQERLNAKRKKCFSEHSPNGWPTS

Transcript Sequence

Gene sequence data has not been registered.